Commit Graph

60 Commits

Author SHA1 Message Date
davidpagnon
b31215c8c0 integration of pose estimation 2024-07-10 10:12:57 +02:00
David PAGNON
b2fe4f7ba3
Pose estimation test (#116)
Edits from @hunminkim98's awesome work at integrating pose estimation into Pose2Sim with RTMLib. Most of the changes in syntax are not necessarily better, it is mostly for the code to be more consistent with the rest of the library. Thank you again for your fantastic work!

General:
- Automatically detects whether a valid CUDA install is available. If so, use the GPU with the ONNXRuntime backend. Otherwise, use the CPU with the OpenVINO backend
- The tensorflow version used for marker augmentation was incompatible with the cuda torch installation for pose estimation: edited code and models for it to work with the latest tf version.
- Added logging information to pose estimation
- Readme.md: provided an installation procedure for CUDA (took me a while to find something simple and robust)
- Readme.md: added information about PoseEstimation with RTMLib
- added poseEstimation to tests.py
- created videos for the multi-person case (used to only have json, no video), and reorganized Demo folders. Had to recreate calibration file as well

Json files:
- the json files only saved one person, I made it save all the detected ones
- tracking was not taken into account by rtmlib, which caused issues in synchronization: fixed, waiting for merge
- took the save_to_openpose function out from the main function
- minified the json files (they take less space when all spaces are removed)

Detection results:
- Compared the triangulated locations of RTMpose keypoints to the ones of OpenPose to potentially edit model marker locations on OpenSim. Did not seem to need it.

Others in Config.toml:
- removed the "to_openpose" option, which is not needed
- added the flag: save_video = 'to_images' # 'to_video' or 'to_images' or ['to_video', 'to_images']
- changed the way frame_range was handled (made me change synchronization in depth, as well as personAssociation and triangulation)
- added the flag: time_range_around_maxspeed in synchronization
- automatically detect framerate from video, or set to 60 fps if we work from images (or give a value)
- frame_range -> time_range
- moved height and weight to project (only read for markerAugmentation, and in the future for automatic scaling)
- removed reorder_trc from triangulation and Config -> call it for markerAugmentation instead

Others:
- Provided an installation procedure for OpenSim (for the future) and made continuous installation check its install (a bit harder since it cannot be installed via pip)
- scaling from motion instead of static pose (will have to study whether it's as good or not)
- added logging to synchronization
- Struggled quite a bit with continuous integration


* Starting point of integrating RTMPose into Pose2Sim. (#111)

* RTM_to_Open

Convert format from RTMPose to OpenPose

* rtm_intergrated

* rtm_integrated

* rtm_integrated

* rtm_integrated

* rtm

* Delete build/lib/Pose2Sim directory

* rtm

* Delete build/lib/Pose2Sim directory

* Delete onnxruntime-gpu

* device = cpu

* add pose folder

* Update tests.py

* added annotation

* fix typo

* Should work be still lots of tests to run. Detailed commit coming soon

* intermediary commit

* last checks before v0.9.0

* Update continuous-integration.yml

* Update tests.py

* replaced tabs with spaces

* unittest issue

* unittest typo

* deactivated display for CI test of pose detection

* Try to make continuous integration work

* a

* b

* c

* d

* e

* f

* g

* h

* i

* j

* k

* l

---------

Co-authored-by: HunMinKim <144449115+hunminkim98@users.noreply.github.com>
2024-07-09 16:39:33 +02:00
davidpagnon
cab870efe8 much faster analysis 2024-06-07 14:11:19 +02:00
davidpagnon
9a60007a5a forgot an os.listdir -> could not find calib when run from trial + version update 2024-04-26 22:06:03 +02:00
davidpagnon
14a4c15fb5 Merge branch 'main' of https://github.com/perfanalytics/pose2sim 2024-04-23 22:46:20 +02:00
davidpagnon
fb191d8a59 added screen axis for c3d so that import possible in blender 2024-04-23 22:46:10 +02:00
David PAGNON
e1cfc22b13
better sorting of json files 2024-04-20 23:12:50 +02:00
davidpagnon
db8014c3f5 few changes to the conversion to c3d 2024-04-16 17:28:37 +02:00
HunMinKim
46652a8eaa
Save to c3d and convert trc to c3d (#92)
* make c3d
2024-04-16 11:14:25 +02:00
davidpagnon
bd9bbb68ab works both for single trial and batch 2024-04-13 18:42:30 +02:00
davidpagnon
88d9ffbfc1 should finish tomorrow 2024-04-12 01:59:32 +02:00
davidpagnon
e858dfd2cd choose ids of persons to display 2024-04-04 23:28:43 +02:00
davidpagnon
2bb5bbbc4b a 2024-03-20 14:16:38 +01:00
davidpagnon
c4773faa68 draft synchro 2024-03-19 10:33:07 +01:00
davidpagnon
f4c764f3cb tests synchro 2024-03-16 15:49:40 +01:00
David PAGNON
ce0abe1929
Faster computation 2024-03-15 10:49:32 +01:00
David PAGNON
864f89c433
Merge pull request #77 from rlagnsals/patch-1
sort by frame number.
2024-03-06 22:32:18 +01:00
davidpagnon
5347f22d49 alternative to multi-person if not satisfying 2024-03-06 22:26:10 +01:00
HunMinKim
23cc2119f1
sort by frame number.
Robust performance on long length frames.
2024-03-06 15:36:22 +09:00
davidpagnon
66df6bbd7c small improvements on multi-person detection 2024-03-04 18:46:56 +01:00
davidpagnon
f7021be051 save images with right ratio 2024-03-01 03:56:10 +01:00
davidpagnon
a948c205cf multi-person analysis almost there 2024-02-28 16:28:09 +01:00
davidpagnon
e9fc09bc2f output type needs to be specified 2024-02-27 21:43:02 +01:00
davidpagnon
05ffe7f36f multi-person frame of work works with single person 2024-02-26 18:13:39 +01:00
davidpagnon
6220c1baa1 fixed only one frame reprojected 2024-02-26 14:57:52 +01:00
davidpagnon
1c2fc6d9d1 minor script changes 2024-02-20 17:21:47 +01:00
David PAGNON
02d2c5c56f
Update reproj_from_trc_calib.py 2024-02-09 00:47:39 +01:00
davidpagnon
6eeaef6445 change version 2024-02-05 17:49:10 +01:00
davidpagnon
bd453fcb58 replace .dot by @ 2024-01-25 11:02:58 +01:00
davidpagnon
070692afaf change RT2qca function -> world_to_camera_persp 2024-01-25 10:53:28 +01:00
davidpagnon
c4de3d03a6 fullproof until limb swapping solved 2024-01-15 11:51:02 +01:00
davidpagnon
57eef5f0c4 undistort to false by default 2024-01-08 13:01:39 +01:00
davidpagnon
76c39fcafd should work on cameras with distortions; still needs to be fully tested 2024-01-02 20:15:43 +01:00
davidpagnon
cc25269920 Merge branch 'draft' 2023-12-17 20:04:18 +01:00
davidpagnon
2977b9bfc9 fix fps 2023-12-13 15:17:07 +01:00
davidpagnon
29d02df4cf reproj tested 2023-12-12 18:44:35 +01:00
David PAGNON
5f25d25f8f
Reproject points in openpose or deeplabcut format 2023-12-12 18:42:26 +01:00
davidpagnon
59d30f917c to be cleaned but works 2023-12-12 18:02:54 +01:00
davidpagnon
9dff5d73be config can be dict, dir, None (from current dir) 2023-12-09 22:06:57 +01:00
davidpagnon
f23f82c6eb bla 2023-12-09 12:53:43 +01:00
davidpagnon
7652d271ff draft for batch processing 2023-12-06 09:48:11 +01:00
David PAGNON
4209aea3ec
weird error where all : and , deleted in copy 2023-12-05 12:11:29 +01:00
David PAGNON
d3c5794506
weird error where all : and , deleted 2023-12-05 12:07:26 +01:00
David PAGNON
418f39143f
missing ":" correction 2023-12-05 11:46:58 +01:00
davidpagnon
f0a6049fb0 fetch draft sync from other branch 2023-12-05 11:39:52 +01:00
davidpagnon
3138ae7a44 rename bodykinematics 2023-11-02 23:49:44 +01:00
davidpagnon
66cf8897d9 line_terminator to lineterminator 2023-11-02 15:21:18 +01:00
davidpagnon
da843a6fc8 improve script 2023-10-30 14:28:48 +01:00
davidpagnon
696cac459e improved scripts 2023-10-30 11:28:42 +01:00
davidpagnon
f5046a9af4 Merge branch 'main' of https://github.com/perfanalytics/pose2sim 2023-10-18 20:05:32 +02:00